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Java Template code

package com.cbrc.pipeline2; import java.io.BufferedReader; import java.io.BufferedWriter; import java.io.DataInputStream; import java.io.FileInputStream; import java.io.FileWriter; import java.io.InputStreamReader; public class Test {     String foldIn;     String fnmFasta;     String foldOut;     String fnmOut;         void init(String rootIn, String rootOut, String fnmInFasta, String fOut) {                 this.foldIn = rootIn;         this.fnmFasta = this.foldIn + fnmInFasta;             this.foldOut = rootOut;         this.foldOut = this.foldOut + fOut;     }     void loadFasta(){         try {             FileInputStream fstream = new FileInputStream(fnmFasta);             DataInputStream in = new DataInputStream(fstream);             BufferedReader br = new BufferedReader(new InputStreamReader(in));             String befTrim , strLine;             while ((befTrim = br.readLine()) != null) {                 strLine = befTrim.trim();             }             br.close();